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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912844.1_cds_XP_016462924.1_56097
CDS Infomation

[gene=LOC107786009] [db_xref=GeneID:107786009] [protein=2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X2] [protein_id=XP_016462924.1] [location=complement(join(22721..22888,22981..23166,23302..23441,23538..23649,23729..23828,23934..24091,24277..24459,24544..24681,24768..24947))] [gbkey=CDS]
Sequence

ATGGGATTCCTTAGAATCCTCTTCTCTAATTCTAGGCTAATCCATAGAATTGGTAGTAAA
CAATTCCATGCCTCCCCTGGTGCACTTGTTGGTTCTTCAACAATTCACCGTTTTGAGTCA
ACCAACACACTGAAAGTGCAATCTTCTCTCTTTACAGAAAATGATGATGATTATTTTCAG
GTGATGGATTTCCCTGGAGGACAGCTTCCAATTACTCCTCAAATGAAATTTATTGCAGAG
TCTTCTGAAAAGAGGTTACCTTGTTATAGAGTCCTTGATGATGATGGCTATCCAATTCCA
GGCAGCATTTTTGAGGAGGTGAGCAAAGAACTGGCAGTTAAGATGTATAGTTCAATGGTG
GCACTTCAAGTTATGGATACCATTTTTTATGAAGCACAAAGGCAGGGGAGGTTATCCTTC
TATCTCACTACTGCTGGAGAAGAAGGTATCAACATAGCATCTGCTGCTGCTCTCACCCTG
GATGACTTCGTCTTGCCTCAGTACAGGGAAGTAGGTGTTATCGTATGGCGGGGCTTCCCC
CTGAAAGAGATTGCCAATCAATTGTTCGGAAACAAGTTTGATTATGCAAAAGGAAGGCAA
ATGCCATGCCACCATGGTTCTAACGAGCTCAATTACTTAACTATTTCTTCGCCAATAGCG
ACACAGATTCCTCAGGCCGCTGGCGTTGCTTACTCTCTGAAAATGGATAAAAAGGAGGCT
TGTGCTGTTACTTATCTTGGAGATGGTAGCACTAGTGAGGGTGATTTTCATGCTGCTTTA
AACTTTGCAGCGGTTTTGGACGCTCCTGTTGTATTTATATGCCGCAACAATGGATGGGCC
ATTAGCACTCCTGTAAACGAACAATTTCGAAGTGATGGAGTCGCCTCAAAGGGGCAAGCC
TATGGAATTAGAAGCCTTCGTGTAGATGGCAATGATGTCTTGGCAACTTATAGTGCTATT
CGTGCAGCTCGCGAAATGGCAATTAAGGAACAAAAGCCAATATTAGTAGAGGCCATGACT
TATAGAGTAGCCCACCATTCAACATCTGATGATTCAACCAAGTATCGACCCGTCGAAGAA
ATAGAGCACTGGAAAACAGCAAAAAGCCCAATATACAGATTCAGAAAATGGATTCAGAGA
AATGGTTGGTGGAATGATGAAAATGAATCTGAACTTCGCAGAGACGCCAGAAAACAGGTA
TTGCAAGCAATGCAAGCAGCAGAGAAGGTGGAGAAACCTCCATTGACAGATTTGTTTACG
GATGTTTATGACAAAGTGCCATTAAATCTTCAAGAGCAACAGAAGTTTACAAGAGATGCT
GTAAAGAGATCTCCAAAAGAATATCCTTCTGATGTTCCTGTTTAA

Peptide Sequence

PEP ID

XP_016462924.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MGFLRILFSNSRLIHRIGSKQFHASPGALVGSSTIHRFESTNTLKVQSSLFTENDDDYFQ
VMDFPGGQLPITPQMKFIAESSEKRLPCYRVLDDDGYPIPGSIFEEVSKELAVKMYSSMV
ALQVMDTIFYEAQRQGRLSFYLTTAGEEGINIASAAALTLDDFVLPQYREVGVIVWRGFP
LKEIANQLFGNKFDYAKGRQMPCHHGSNELNYLTISSPIATQIPQAAGVAYSLKMDKKEA
CAVTYLGDGSTSEGDFHAALNFAAVLDAPVVFICRNNGWAISTPVNEQFRSDGVASKGQA
YGIRSLRVDGNDVLATYSAIRAAREMAIKEQKPILVEAMTYRVAHHSTSDDSTKYRPVEE
IEHWKTAKSPIYRFRKWIQRNGWWNDENESELRRDARKQVLQAMQAAEKVEKPPLTDLFT
DVYDKVPLNLQEQQKFTRDAVKRSPKEYPSDVPV

Transcript Sequence

Gene sequence data has not been registered.